Sequence Details

BLAST PRIMER
Symbol
hsa_NLGN1_0012300
Sequence Length
532 nt
GC Content
0.3515
GUCUCUCCUGCCUACUCAGCUCUCCCCACAAAAAUAACUCUGGACUAAUUUGUCCCCCAUGGGUGUCUUCUUCCUCAAGCUAUCUUUUCUGCUUCCUGCUUCUUAACUUUGUGCUGGUCUCUAAGUAGAAAGUGGAAAGGAGAUGAAAAAAAACAAUAAGCCAAGUUUUGAAAAGUCUUCUUUUUACUUCAUGGACCUUUGUUACUGAGAAGAGAGUUAAAAAAAUUAAUUUGGUUUUUGAAAAUCAAACACAAGACAAGGAGUAUACAACAAAGUGAAAUUUGAAAUAUAUAUAUUUUUAGUCUGCCUUCAUCAAAAGUUGGCAGGAUUUCCUUCCACAGUCUGGCAAUUUGUGAGUUAAGCUUAGCCUGCAUAUUAGGUGAGUUUUAUUAUUUUCUAUUGUCUUCAGACGCAUUUUGAAAGUCAUAUUAGGAAGAGGUUAAAUAGGAAGUGUCUUUGUCAAACAUCACCUUAAGUUGGAAGCCCCAUUAAGAGGGAAUUUUACUCUCUCUUUUAUAAUAUAAUGCAUUAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-106.10 kcal/mol
Ensemble Metrics
Free Energy: -117.60
Frequency: 0.0000
Diversity: 201.24
Structure Visualization
Structure Prediction
MFE Structure Prediction
(....(((((((.(((.(((((((..(.((..(((((....((((......)))).(((((((((.(((.......))).))))..((((((((((.((.............)).)).....))))))))((((((((((((((.....(((((..........))))).....)))))))))))))).)))))....)))))..)).)..)))))))...........((((((((....))))))))....((((.(((((((((...((((......)))).......))))))))).))))............))).)))))))...)((..(((((.........))))).((((....)))).(((((...((((((((((.(((((((((((((..((((...(......(((...))).....)...))))...))))))))))).....)).)))).)))))).....(((.....)))..((((((((.......))))))))..........)))))..))
Thermodynamic Ensemble Prediction
(,,......}}(((.,.,({.....................((((......))))...{{(((.{.{{{{,,,{,.{{{,..,,,,,{{{{{{{,{{(({{,,,.,,{,,,,|,.|||,...,}}}}},||(((((((((((((.....{((((..........)))}}.....}))))))))))))}}}}})),,|.,|},,..|}|}||}}|||||,,.........|{{{(({{,,..,}}))))}..,.|(((,(((((((({...((((......}))}...,...}}}}}}}}}.}}||(((..{......,},.)))}|||,..,|,,}|,..{{{{{{{{{{,,|||{{,.{((((({,((((.....)))))}))))}.|}|||{{{{{||||}{{{||||}....,,|||.,},}}...,})))}))))....,}}))}}}}|}.,.,,},,,}}.}},}}},.,}.|||,,}}}))),.{(((((((.......))))))))............)}..}))
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