Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NLGN1_0014000

Sequence Length

257 nt

GC Content

0.4163

GCCUCCCCAGCCAGGCAGAAUUGUGAGUCAAUAAAUUACCCAUUCUUGGGCAGUCCUUUAUAGCAGCAUGAGAAUGGACUAAUACACCAUCCAAACUGUUCCAACCUCUGCCUGUUACUCAGUUCCAAAGUUGCUUCCACAUUUUUAAGUAUCCUUACAGCAAUGCCCCACUACCCAGUAACAAUUGACUGUGUUAAUCCGUUUUCAUGCUGCUAAUAAAGACAUACCGAAGACUAGGUACUUUUUAAAGAAAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-60.30 kcal/mol

Ensemble Metrics

Free Energy: -65.37

Frequency: 0.0003

Diversity: 37.38

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((........))))...((((.....))))......((((....))))..(((.((((((((((((((((((((((.(((((((....................((....(((((((..((......((((((.............(((....)))))))))........))..)))))))...)).))))))).))))))))))))))))).)))))))).((((........))))((((((.....))))))

Thermodynamic Ensemble Prediction

((((........))))...{(((.....}}))....{,(({(.,,,|}||..((,{((((((((((((((((((((((.(((((((...........{...........,..(((((((..((......((((((.............({{....))}))))))........}}..)))))))...}..))))))).)))))))))))))))))},))))))).{{||.,,,,...))))((((((.....))))))