Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NLGN4X_0003000

Sequence Length

250 nt

GC Content

0.4240

GCUGCCUUGGAGUUUUCAUAAGAAAUUGUCCCUGGAGGUGUUGGAUGAUCACAGCUUCCUUGGAGCAUUGCAGUUGCUGGAAUCCAGUUUCAGGAUUAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAUCUCUGCUCACUGCAGCCUCCACCUCCCAGGUUCAAGUGAUUCUCCUGCCUCAGCCUGCCGAGUACCUGGGACUAUAGGUGCCCACCACCACACCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.59 kcal/mol

Ensemble Metrics

Free Energy: -59.86

Frequency: 0.0010

Diversity: 41.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....((((...((((......(((..((((((((((..((.........(((((...))))).(((((((.(((((...)))))..(((((((.....................................................)))).)))...)))))))))..))))).)))))..)))))))..)))).....))))(((..(.(((((((......))))))).)...........)))

Thermodynamic Ensemble Prediction

((((....((((...((((......(((..((((((((((..((..{{{{...(((((...}))))..,,{{{..||{{{{{{||,}}..}|}|}||.....................................................)))).((((.....))))))..)))))))})))..)))))))..)))).....))))(((..,.(({{{((,,....}})))}),}...........)))