Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NSUN2_0004600

Sequence Length

358 nt

GC Content

0.4218

CCACGCAAAAGAGAUUCUCCAUUGCUUAAAGAACAAAUAUUUUAAGGAAUUGGAGGACCUGGAGGUGGACGGUCAGAAAGUUGAAGUUCCACAGCCACUGAGUUGGUAUCCUGAAGAACUUGCCUGGCACACAAAUUUAAGUCGAAAAAUCUUGAGAAAAUCGCCACACUUGGAAAAGUUUCAUCAGUUUCUAGUUAGUGAAACAGAAUCUGGAAAUAUUAGUCGUCAAGAAGCUGUUAGCAUGAUCCCACCACUGCUCCUCAACGUGCGGCCUCAUCAUAAGUGGAGACGGCACUAUGAGAAAAAACAUUGAUGUUUGGAAAAAGUGGACCACCUUAAAUAGCUUGCAGCUACAUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-80.50 kcal/mol

Ensemble Metrics

Free Energy: -86.89

Frequency: 0.0000

Diversity: 93.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.....((.(((((((((.(((((((........))))))).)).))))))).))....)))...))(((...((((((((((((((...((((((.((((....((((.((((((.((((((.......((((((.........))))))......)))).....))..))))))..))))...)))))))))).(((((..(((.((...........)).)))..)))))((((((.......)).)))).((((..((((.(.(((..(....)..))).).))))..))))...(((((....))))).......)))))............)))).)))))...)))

Thermodynamic Ensemble Prediction

(,{(.,.....{(.(((((((((.(((((((........))))))).)),})))))).)){(..(((((...(((,....|))).,,}))))..)|{((((,((((,,..(({(,(({{((.{{((((.......,{{{{|,.......,)))}))......)))).,,,,))..}}}||||.}|||.{{||}|||,,},.|||||,,,||}|},},....}}.}||{.|,{{||||,((({({......{|{{|,,|,((((..((((.(.(((..,....},.))).).))))..))))...(((({....})))),,,...}))))...........,.))).}))))).,.)))