Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_OGDH_0000800

Sequence Length

250 nt

GC Content

0.3560

GCAGUUGUGAAAAACUUCAGGACAAAAAUGUUUCAUUUAAGGACUUGUGCUGCUAAGUUGAGGCCAUUGACGGCUUCCCAGACUGUUAAGACAUUUUCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGCCAUGGGCGAUAUGGUCACCCUCAAGGAGAAUGAAGCUGGCCAAGCAGACAUCUGACAUUUGAGAAGAUUCUUUGACUGGAGAUACCCAGAAACUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-40.90 kcal/mol

Ensemble Metrics

Free Energy: -44.17

Frequency: 0.0050

Diversity: 56.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.((((....)))).)))......(((((((((..(((..(((.((....((((((((((......))))))...))))....)))))..)))........................................................((..(((.(((...))).)))....)).)))))))))..))((..(((....)))......((((....))))...((((......))))....))

Thermodynamic Ensemble Prediction

((.(((.((({....)))).)))...,,,((({{{{{{..(((..(((.((....((((((((((......))))))...))))....)))))..))).......................................................||({.({{.{{|.,,))}.}}},{,.||,}}}}}}}}|{.}}{{.,|{{...,||,......,|||...,))))}},((((......))))....))