Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_OGDH_0001600

Sequence Length

365 nt

GC Content

0.4904

GCAGUUGUGAAAAACUUCAGGACAAAAAUGUUUCAUUUAAGGACUUGUGCUGCUAAGUUGAGGCCAUUGACGGCUUCCCAGACUGUUAAGACAUUUUCACAAAACAGACCAGCAGCAGCUAGGACAUUUCAACAGAUUCGGUGCUAUUCUGCACCUGUUGCUGCUGAGCCCUUUCUCAGUGGGACUAGUUCGAACUAUGUGGAGGAGAUGUACUGUGCUUGGCUGGAAAACCCCAAAAGUGUACAUAAGGGUUCUAUGGCCUGGAUGAGUCUGACCUCGACAAGGUCUUCCACUUGCCCACCACCACUUUCAUCGGGGGACAGGAAUCAGCACUUCCUCUGCGGGAGAUCAUCCGUCGGCUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-102.30 kcal/mol

Ensemble Metrics

Free Energy: -108.97

Frequency: 0.0000

Diversity: 126.30

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(((.((((....)))).)))..(((((...)))))..(..((.((((((((.....((((((......)))))).....(((((...............)))))...))))))).).))..)....(((((.....(((((......)))))))))).((((((..(((.((((.(((((.(.(((..(((((.(((.((((....(.(((...((.(((((...(((((...............)))))...))))).))...))))...)))).))).)))..)).))).))))))..((.........)))))).)))..)))))))((((.(((..(((.....)))..)))..))))

Thermodynamic Ensemble Prediction

(..(((.((((....}))).)))..{{{{(...}}}},..{,,{{,{({({({{.,||,((((((......))))))...,.{((({..,,....,},....,}}}}.,{|||||||{|.,|,,}.,,,{,,{{,....(((((......))))),))))}||||((,.(({.{{{{.{{||{.{.{((..,,|||.{((.((((,,|,{.{{{...({.(((({,..{((((...............)))))...})))).}},,.)))},,.|}}}.}}},)))},|,.,||,||||,|,.,,.........)))))},)))..}})))})((((.((({{(({.....)))}.)))..))))