Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PAN3_0011000

Sequence Length

162 nt

GC Content

0.4815

CCAAGGAAGUAUCGCCUGGGGAUGCUGGAGGAGAGGCUAGUUCCGAUGGGAUCAAAGGCACGAAAAGCAAAGAACCCUAUUGGCUGCCUUGCUGACAGGUGUAAAUCAGGAGUACCCAUCAAUAUGGUUUGGUGGAACAGAGUCACAGAAAACAAUUUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.30 kcal/mol

Ensemble Metrics

Free Energy: -38.62

Frequency: 0.0009

Diversity: 28.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

(....)..(((...(((((..((((((..((.(((((.((..((((((((.......((.......)).......))))))))))))))).))..)).))))...))))).....(((((((......)))))))......................)))..

Thermodynamic Ensemble Prediction

{,...,..(((,{.(((((..{{{(((..((.(((((.((..((((((((.{{....((.......))...}}.,))})))))))))))).))..))),|}}...))))).}}}}(((((((......))))))).......|............,}},}..