Sequence Details

BLAST PRIMER
Symbol
hsa_PAN3_0025500
Sequence Length
236 nt
GC Content
0.4195
GAUGCGAAGUGUAAAUGACAUCAUGCCCAUGAUUGGUGCUCGAUUUUAUACUCAAUUGGAUGCUGCUCAAAUGAGAAAUGAUGUCAUAGAGGAAGACCUUGCAAAGGAGGUUCAAAAUGGAAGACUGUUUAGGCUCCUAGCAAAAUUGGGAACAAUCAAUGAGAGGCCGGACACUGAAUGUUUUACUAGCACUGGGUGCUCACCAUGCAACUGAAGAAAAUGUGGAAACUCAAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-46.60 kcal/mol
Ensemble Metrics
Free Energy: -50.88
Frequency: 0.0010
Diversity: 55.90
Structure Visualization
Structure Prediction
MFE Structure Prediction
(.((((..(((...(((((((((((((((....))).))...........((((.((((.......)))).))))..)))))))))).......((((((......))))))......(((((((.((((((..(((..((...(((((......))))).....)).)))..))))))))))).))(((((...))))))))..)))).)(.........((....))......)
Thermodynamic Ensemble Prediction
,.((({..(((...(((((((((((((((....))).)).,,,,,.....{{{|,||||......,}))}.))))..)))))))))).......((((((......)))))).....,({{((((.((((((..(((..((...(((((......))))).....)).)))..))))))))))).)}|((({,.,))))}}})..}))).|(...,.....{{....,}}}....)
Back