Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PAN3_0026200

Sequence Length

205 nt

GC Content

0.3659

CACCAUCAGGUGAAUGAUGUUCCUGCUUUUGUUUUUUCCACUUGUAUAUGCACUAAUUUUAAUUUUUUAAAGACUUUUUCUGAUCUUUGAACUUUUGCCACAUUGUAUACUUAUAAUGGGAAACUUUGCAAGGACAUUUUUGGGAAGCAAUGCUGGGCAGCGUUUUUGCCAUUGAGGGUUGCAGAAUUUGCUCUUUUUGGGAUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.30 kcal/mol

Ensemble Metrics

Free Energy: -44.42

Frequency: 0.0002

Diversity: 62.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((.(((((((((.(((((((((((..((((..((((((..(((...((((.............(((((((((.......).))))))))......((.(((((((....)))))))))......))))...)))....)))))))))).)).))).))))))))))))..)))))(((.(((((........))))).)))..

Thermodynamic Ensemble Prediction

((((.,,,|||{({.(((((((({((..(((({,{(((((..(((...((((.............(((((((({.......).))))))))...,,.((.(((((((....))))))))),,,...})))...)))....)))))))))).)).))),))))))}}})||{,|||{||,.|({.....,}},}}),,.,.))}})