Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PDS5B_0001500

Sequence Length

250 nt

GC Content

0.3520

GUCAAACCAGACAUUGAGAUCACUGGCUUUUUGGAUACCUUGUGUUGGCUGCAUUUCUUGUAUAUUUGGAUACCGAGUGUUGGCUACAUUGGAUACCUUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCUUAUGUUAUCUUCCAGUUGUUCAGAGCUUCCUGUUACUGCUUCAGUGAGCCUCUUGCAGUCCCUCAUAGAUUCCUGCAGUCUUCCUGUGUUCUAGCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.00 kcal/mol

Ensemble Metrics

Free Energy: -42.03

Frequency: 0.0014

Diversity: 41.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...))(((......(((.(((.((((....(((....(((((..(((((((........((((((((...)))))))).((((.(((((((..........................................................(....)........((((....(((......)))..)))).)))))))))))...))))).))..)))))..)))...)))).....))).)))..)))

Thermodynamic Ensemble Prediction

((...))(((.,....(((.(((.((,,....(((....{((((..(((((((........((((((((...)))))))).((({.(((((((...............................................................,......,,|||{.,,.{((,,,...|||..}}}}.,,)))))))))...))))).))..)))))..)))...)),...)).))).)))..)))