Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PDS5B_0002100

Sequence Length

250 nt

GC Content

0.3320

UUGUUCAGAGCUUCCUGUUACUGCUUCAGUGAGCCUCUUGCAGUCCCUCAUAGAUUCCUGCAGUCUUCCUGUGUUCUAGCUGGUAUGUCUUUGUCUUUGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAUUUAAAUGCUGUGAAAGCAUUGAAUGAAAUGUGGAAAUGUCAAAAUCUGCUCCGACAUCAAGUAAAGGAUUUGCUUGACUUGAUUAAGCAACCCAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.20 kcal/mol

Ensemble Metrics

Free Energy: -38.46

Frequency: 0.0000

Diversity: 69.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..(((((((.(((.........))).))).)))).))))(...(((.((((....(((..((..(((.....)))..))..)))....)))).)))....................................................((((((.((((.....))))))))))...(((((((...............))).))))........((..((((((((.....)))))))).))..)

Thermodynamic Ensemble Prediction

{{({.,((((({{,({(,,,..,,..|||.|||.,}}}.||||{....,..{{{,..,,||||.,|,.}}|,},..)))}.))..,}}}},}},}|,|||....................................................((((,((((((.....))))))))))...,{{((({...,,,.....,,|||}}.,}||{{{{{.{{{...,|||||||,}}},),,)))),.}},,)