Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PDS5B_0018100

Sequence Length

258 nt

GC Content

0.3992

ACAGAUGCCAGUGUCAAGGCCAUAUUUUCAAAAGUGAUGGUUAUUACAAGAAAUUUACCUGAUCCUGGUAAGGCUCAGGAUUUCAUGAAGAAAUUCACACAGGUGUUAGAAGAUGAUGAGAAAAUAAGAAAGCAGUUAGAAGUACUUGUUAGUCCAACAUGCUCCUGCAAGCAGGCUGAAGGUUGUGUGCUUCCAGGGAAAAAGACAACUAAACUUUGGGUUCCAGAUGAAGAAGUAUCUCCUGAGACAAUGGUCAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.00 kcal/mol

Ensemble Metrics

Free Energy: -58.06

Frequency: 0.0001

Diversity: 67.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((.((((.(((..(((((((.....(((((....)))))..(((((...(((((.(((....))).)))))))))).((((....)))).....(((((.((...(((((((....(((........)))......))))))).)).)))))..(((((.(((((.((........)).))))).)))))................(((((...)))))....)))))))..)))..)))).))).))..

Thermodynamic Ensemble Prediction

.....,((((.((((.(((..((((((({,...((({{,,,,,||,|,.({{{{...(((((.(((....))).)))))}}}}}.||{,....}}|||....|||{,.,....{{|||||,...,,,....{{,.||....,}.}}}}}},.}}.)}),).}|((((.(((((.((........)).))))).))))}..........,,....{{(((...))))}}},,}}}))))..)))..)))).)))}},..