Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PDS5B_0021800

Sequence Length

230 nt

GC Content

0.4043

UGCUCUUAUUAAACAAGUGAACAAAUCAAUAGAUGGAACAGCAGAUGAUGAAGAUGAGGGUGUUCCAACUGAUCAAGCCAUCAGAGCAGGUCUUGAACUGCUUAAGAGCCUUGCUUCCUGUUUUACAUCACAAAUCUAAAAAAGGACCCCCCCGUCAAGCCAAAUAUGCCAUUCAUUGUAUCCAUGCGAUAUUUUCUAGUAAAGAGACCCAGUUUGCACAGAUAUUUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.40 kcal/mol

Ensemble Metrics

Free Energy: -44.83

Frequency: 0.0000

Diversity: 44.60

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..(((((.....))))).............(((((((.(...(.((....)).).).))))))).(((((......)))))((((((((((((.....)))))).)).))))((((.(((((.((.....)).))))).)))).....................).))((((..(((((..(((((..((((((.....)))))...)..)))))..))))).))))

Thermodynamic Ensemble Prediction

((,..,({{{......,|||.....||,...|,(((((((.(...{.,{....}}...}.)))))),.(((((......)))))((((((((((((.....)))))).))}}))){{((.{((({.,,.....,,.})))}.)))}.......}},...........),))((((..(((((..(((((..{(((((.....)))))...}..)))))..))))).))))