Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PDS5B_0024900

Sequence Length

330 nt

GC Content

0.3879

CUUCCAGGGAAAAAGACAACUAAACUUUGGGUUCCAGAUGAAGAAGUAUCUCCUGAGACAAUGGUCAAAAUUCAGGCUAUUAAAAUGAUGGUUCGAUGGCUACUUGGAAUGAAAAAUAAUCACAGUAAAUCAGGAACUUCUACCUUAAGAUUGCUAACAACAAUAUUGCAUAGUGAUGGAGACUUGACAGAACAGGGGAAAAUUAGUAAACCAGAUAUGUCACGUCUGAGACUUGCUGCUGGGAGUGCUAUUGUGAAGCUGGCACAAGAACCCUGUUACCAUGAAAUCAUCACAUUAGAACAAUAUCAGCUAUGUGCAUUAGCUAUCAAC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.60 kcal/mol

Ensemble Metrics

Free Energy: -69.29

Frequency: 0.0000

Diversity: 104.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((...............)))))))..........((((((...((((((..(((((((((....((.((((((((...)))))))).)))))))).))).......................)))))))))))).......(((.(((((..(((((((((..(((((.(((.((.((.(..((((((((..............(((((.......)))))...((((.((((((...(((....)))...))))))))))..))))))).)..).)).)).))))))))...))))))......)))...))))).)))...

Thermodynamic Ensemble Prediction

{.,((((((....,,....,,...))))))|...,,|,.{.((((((...((((((,|{,,{((((,....{{.|((((({,...,}}})|||.}}|||}||.|||..,{........,),.,}}|...}))))))))))).,,,...|{|,({{{,..,,,{{{{((,.({((({(((.,,.,(,....(((((((........,,...{(((,{...,{,.|}}}}.,|((({,{{{{|{..,|{{,..,))}...))))))))),..)))))))..,,..,,.))})))),,}}...}}}}})..,{..,}},,.,)))),)))..}