Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PHKA2_0000800

Sequence Length

203 nt

GC Content

0.5468

UGCGCCCUAUCCACUCCUCCACAUCCAGCCCUACCAUCUCCAUCCACGAGGUGGGCCAUACCGGAGUCACCAAAACUGAGAGGAGUGGCAUUAACAGACUGAGGAGUGAAAUGAAACAGAUGACUAGGCGGUUUAGUGCUGAUGAACAGUUCUUUUCUGUGGGCCAGGCCGCGUCCAGCAGUGCGCAUUCCUCCAAGUCUGCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.10 kcal/mol

Ensemble Metrics

Free Energy: -59.48

Frequency: 0.0008

Diversity: 36.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((........((((((((((..(((.......(((((((.......)))))))........)))...........)).)))))))))))(...((((((((((((((.......((...((...(.(((((((.(.(((.(((((........))).)).))))))))))).).))...))...))))))))..)))))).)

Thermodynamic Ensemble Prediction

((,.......,((((((((({..{((.{,,,..(((((((.......))))))),,......))}...........)).)))))))))))(...((((((((((((((...,,..,{...{(,{.,.(((((((.(.(((.({(((........})).)).))))))))))),),,}.,.}}...))))))))..)))))).)