Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PIP5K1A_0005200

Sequence Length

271 nt

GC Content

0.4834

UGAAGGGAGCAACCUGACCCCUGCUCAUCACUACAAUGACUUUCGUUUCAAGACCUAUGCACCUGUUGCCUUCCGCUACUUCCGGGAGCUAUUUGGUAUCCGGCCCGAUGAUUACUUGUAUUCCCUCUGCAGUGAGCCGCUGAUUGAACUCUGUAGCUCUGGAGCUAGUGGUUCCCUAUUCUAUGUGUCCAGCGACGAUGAGUUCAUUAUUAAGACAGUCCAACAUAAAGAGGCGGAAUUUCUGCAGAAGCUGCUUCCAGGAUACUACAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-57.40 kcal/mol

Ensemble Metrics

Free Energy: -63.98

Frequency: 0.0000

Diversity: 96.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...(((((..........))))).)))(...(((((...)))))...........(((.....)))((((((.......)))))).....((((((((((..............(((...(.(((((((.((.(((((...(((((((.....(.(((((.(..((((.........))))..)))))).).....))))))).........................)))))..)).))))))).).)))..)).))))))))...)

Thermodynamic Ensemble Prediction

((({({({(((....,..,,,)}}}}.|},{...{((((,..|||||....|,,....{{{...,,,|}{{{(((,,,..,{||||||{{{{.,((((((((({..,,.,.,,,,..||{.....{{{||||,||.{||{{,,|{{{{{{{.,|,||,|||||,,,,||||.........}))),.)))}}).),},,.))))))),,.........,,,.........,,}}|}}..||.}}}}))).,,,))}}),.)))},}},..,)