Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PIP5K1A_0005700

Sequence Length

300 nt

GC Content

0.4567

AACCUCAACCAGAACCCUCGGACUUUGCUGCCUAAAUUCUAUGGACUGUACUGUGUGCAGGCAGGUGGCAAGAACAUUCGGAUUGUGGUGAUGAACAAUCUUUUACCAAGAUCGGUAAAAAUGCAUAUCAAAUAUGACCUCAAAGGCUCAACCUACAAACGGCGGGCUUCCCAGAAAGAGCGAGAGAAGCCUCUUCCCACAUUUAAAGACCUAGACUUCUUACAAGACAUCCCUGAUGGUCUUUUUUUGGAUGCUGACAUGUACAACGCUCUCUGUAAGACCCUGCAGCGUGACUGUUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.80 kcal/mol

Ensemble Metrics

Free Energy: -72.15

Frequency: 0.0000

Diversity: 73.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((..((((.((((.......((((((((((............((((((...))))))..)))))))))).......)).)).))))(((.....)))(((((((......)))))))...(((((...))))).......))).)(((.(.....(((((((((((..((((..(((((((((....))))...((((((((((((...(((((((...............)).))))).)))))))))).))..........))))))))).))).))).))..)))....).)))

Thermodynamic Ensemble Prediction

(.{{{,,((((,{{,{,..{{..((((((((((..........,.((((((...)))))).,))))))))))......,)|,||,|}}},,,..,},))){((((((......))))))}...(((({...})))).,.....})).){{,,,..,,.{({((((((((..((({.,(((((((((....))))..,({{{{{{((((({{.{({,,{{,....}},..,...,}..)))))}),,,)))}||,,,....,,....))))))))).})).})),))..})),.,}),)))