Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PIP5K1A_0006000

Sequence Length

339 nt

GC Content

0.4808

GUGCUGCAGAGCUUCAAGAUAAUGGAUUACAGCCUCUUGAUGUCAAUCCAUAAUAUAGAUCAUGCACAACGAGAGCCCUUAAGCAGUGAAACACAGUACUCAGUUGAUACUCGAAGACCGGCCCCCCAAAAGGCUCUGUAUUCCACAGCCAUGGAAUCCAUCCAGGGAGAGGCUCGACGGGGUGGUACCAUGGAGACUGAUGACCAUAUGGGUGGCAUCCCUGCCCGGAAUAGUAAAGGGGAAAGGCUUCUGCUUUAUAUUGGCAUCAUUGACAUUCUACAGUCUUACAGGUUUGUUAAGAAGUUGGAGCACUCUUGGAAAGCCCUGGUACAUGACGGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-86.10 kcal/mol

Ensemble Metrics

Free Energy: -93.74

Frequency: 0.0000

Diversity: 112.95

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.((..(((((.......((((.(((((.((((((.((((((((.........)))..)).))).))))))..........(((...))).((..(((((....))).))..)).((((........))))))))).))))...((((((...((((((...(((...)))....))))))..))))))....(((((.(((...((((((.....))))))......((((((.((((....)))).))))))..))))))))((((((..((...........))..))))))))))))).)))))(((((.............))....)))

Thermodynamic Ensemble Prediction

(((((,((..(((({..{...,((((.(((({.((((((.((({{|{{.,,......}}}..}).))).)))))),.,,,.,}}.{||...,,)}||}}((.{(,,.,}}}.|,..,..((((........)))}|||}},||}}...((((((.,.((((((.,,(((...)))..,.)))))),.))))))....{((((.(({,.,{{{|{{,,.,,)|}||},.,,,.((((((.((((....)))).)))))),,)))))}}},{((({..{{...|},.....}}..))))}}))))))),)))})|{|,|,...,},,.,},.....,}}))