Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PIP5K1A_0006700

Sequence Length

232 nt

GC Content

0.5216

GACACUGUCUCAGUGCAUCGCCCAGGCUUCUACGCUGAACGGUUCCAGCGCUUCAUGUGCAACACAGUAUUUAAGAAGAUUCCCUUGAAGCCUUCUCCUUCCAAAAAGUUUCGGUCUGGCUCAUCUUUCUCUCGGCGAGCAGGCUCCAGUGGCAACUCCUGCAUUACUUACCAGCCAUCGGUCUCUGGGGAACACAAGGCACAAGUGACAACAAAGGCAGAAGUGGAGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.30 kcal/mol

Ensemble Metrics

Free Energy: -57.53

Frequency: 0.0053

Diversity: 64.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((((.((((((....((....)).....)))))))))))))(.(.(((((((.(((.........((((((........))))))(((((....((((..........((((((.(((.((........)).)))))))))((((.(((.....(((..........)))......))).))))))))...)))))....((....))....)))...)))))))).)

Thermodynamic Ensemble Prediction

((.(((((.((((((....((....)).....)))))))))))))(.(.(((((((,(((......,..{(((((........)))))}(((((.,..(({{..........((((({{(((.((........)).))))))))}{{((,(((.....,||,.........,})}}...,))).))))))))...}})))....||,...,}....)}).,.)))))))).)