Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PLXND1_0000900

Sequence Length

250 nt

GC Content

0.4800

GGCAUGAUCCUGCAGAUCUCGGGCAGCCUGCCCAGCCUCAGUGGCAUGGAGAUGGCCUGUGACUAUGGGAACAACAUCCGCACUGUGGCUCGGGUCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGAGUACCGGAAGAUCGUGCAGCGCUACUACAAGCAGAUCCAGGACAUGACGCCGCUCAGCGAGCAAGAGAUGAAUGCCCAUCUGGCCGAGGAGUCGAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.10 kcal/mol

Ensemble Metrics

Free Energy: -66.49

Frequency: 0.0041

Diversity: 28.41

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((.(((((..(((((.(((......((((((((.(((((...(((((.((.(((((....)))))..)).).))))))))).)))).))))))).......................................................((((.........))))...(((......))))))))))))))))).).((((((..((.((...(((((......))))).))))..))))...))

Thermodynamic Ensemble Prediction

.(((((.(((((..(((((.(((...,,,(|||((((.(((((.,.{(((,.((.(((((....)))))..)).,.))))))))).)))),))))})).......................................................((({,{......}))))...(((......))))))))))))))))).).((((((..((.((...(((((......))))).))))..))))...))