Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PLXND1_0001500

Sequence Length

168 nt

GC Content

0.5714

AGUGGUUCGCCUCCAGCACACAGAGCUACAUCCUUCGGGACCUGGACGACACCUCAGUGGUGGAAGACGGCCGCAAGAAGCUUAACACGCUGGCCCAUUACAAGAUCCCUGAAGGUGCCUCCCUGGCCAUGAGUCUCAUAGACAAGAAGGACAACACACUGGGCCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.60 kcal/mol

Ensemble Metrics

Free Energy: -42.84

Frequency: 0.0052

Diversity: 28.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((...)))(((..((.(.(((.......((((((.((.((.(((.(.((((((((.((((..(...((((((..............)).))))..)..))....))))).)))))).)))..))))....((((...))))..)))))).......)))))).)))

Thermodynamic Ensemble Prediction

,(((...}}){{(,.((.(.(((.,.....((((((.((.((.(((.(.((((((((.((({..,...((((((..............)).))))..,..},....))))),,))))},)))..))))....((((...))))..)))))).......)))))).)})