Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_POLR2A_0002500

Sequence Length

336 nt

GC Content

0.5387

GUGGAACGGCACAUGUGUGAUGGGGACAUUGUUAUCUUCAACCGGCAGCCAACUCUGCACAAAAUGUCCAUGAUGGGGCAUCGGGUCCGCAUUCUCCCAUGGUCUACCUUUCGCUUGAAUCUUAGUGUGACAACUCCGUACAAUGCAGACUUUGACGGGGAUGAGAUGAACUUGCACCUGCCACAGUCUCUGGAGACGCGAGCAGAGAUCCAGGAGCUGGCCAUGGUUCCUCGCAUGAUUGUCACCCCCCAGAGCAAUCGGCCUGUCAUGGGUAUUGUGCAGGACACACUCACAGCAGUGCGCAAAUUCACCAAGAGAGACGUCUUCCUGGAGCGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-93.60 kcal/mol

Ensemble Metrics

Free Energy: -100.52

Frequency: 0.0000

Diversity: 140.47

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((...((((.(((((((((((((........)))))).(((((((......)))).....((((((......)))))))))((((((((...(((((((....((..(.((((........(.(((((((((((((.(((........)))))))))(((.((.(((((....((.((..(.(((((((..........)))))))...)..)).))....))))).)).)))..)))))))).....)))).)..))....)))))))....)))).))))....))))).)))))).....)))))(.....((........))......)

Thermodynamic Ensemble Prediction

(((((..,(({(,((((((((({(((,.......}}}})}.,,{({{{......||||,,,..((((((,,,,,,||}|}},||||||,|||,..|{||||{,|..||.,{(((({,......||||{||,,.((((((.(((.,....,.))))}|||},{{.({.{{,{{,{{.|{,{{,...{({((((,,,...,...)}))))),,|||,||,}}...,)))))})},|}|((({{{|,,......)}})))})}})))))))))))}}}}))))}))}}.,,.)}})},}})))}.,...}})))(..{{,{....}}}}.,}}},,}})