Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0001600

Sequence Length

283 nt

GC Content

0.3816

AGAACCUCCACUAUAUCCUUGAUUUUGAUCUCCAUUCCAUUUCUCUUAUCAUUGUUAACCACAGCCCUGUAAGACCAGUAAUAAAUUUCUGUCUACUGAUGAUUCUAUUGAAUUGAAAUGCAGAGCCAAUGGCAUCUUUCAGAAAAGAUAUGAAACCAGUUCUACAUCAGCUGGUGAUCGAUAUGAUUCCUUGCUGGGUCGCUCUGGAUCAUACAGUUACUUAGAAGAAAGAAAACCUUACAGCAGCAGGCUAGAAAAGGAUGACUCAACUGACUUUAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.20 kcal/mol

Ensemble Metrics

Free Energy: -51.62

Frequency: 0.0000

Diversity: 98.68

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...............))(..((((((..(((((.((.(((((..................(((((((((((..((((((((......))).)))))..(((((....)))))..........(((...))).((((((((.((...(((((..((((..(.((.(((((.((.((((.....)))).)).))))))).)..)))).)))))...)).)).....))))))....))))))).....))))))))).)))))........))..)))))).)

Thermodynamic Ensemble Prediction

((,...........,,,{,,,.,..,||,.......,..,||||,,,.,,,,,,{,......(((((((((((..{{({{,,....,{{|||,|}|||{.((({({{,,|}}||,......,||{{|,,,))}|||{{||}}..,}}}||{||.,((((,,{.{{.,{{|{,||,((((,...,)))},},.))))))}.)..)))),)))),},}}}.,,},},,,,,},.....))))))).....)))),},,)}))))),.......},..,,...,})