Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0001900

Sequence Length

444 nt

GC Content

0.3806

ACUUACCAGCGUUAUAGGCCAGUAUCAACUUCAAGUUCAACCACUCCAUCCUCUUCACUUUCUACUAUGAGCAGUUCACUGUAUGCUUCAAGUCAACUAAACAGGCCAAAUAGUCUUGUAGGCAUAACUUCUGCUUACUCCAGAGGAAUAACAAAAGAAAAUGAAAGAGAGGGAGAAAAAAGAGAAGAGGAGAAAGAAGGAGAAGAUAAAUCACAACCUAAAUCAAUCAGAGAACGACGACGACCAAGAGAGAAAAGAAGAUCUACAGGAGUUUCAUUUUGGACACAAGAUCUUUAUGAACAAAUUCUAGCUGAAAAUGAAAAGCUGAAGGCACAGCUACAUGAUACAAAUAUGGAACUAACAGAUCUUAAAUUACAGUUGGAAAAGGCCACCCAGAGACAAGAAAGAUUUGCUGAUAGAUCACUGUUGGAAAUGGAAAAAAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.80 kcal/mol

Ensemble Metrics

Free Energy: -80.98

Frequency: 0.0000

Diversity: 102.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((.........((((....((..((((...(((..(..(((.....(((((.((((((....(((((((.......(((((((((((...((((...........)))))))).)))))))....))))))).(((...)))..................))))))))))).....)))..)..)))...))))..))........................................((((..........(((((((.....((((((((((((.........((.....)).....(((.....))).(((...(((((......))))).)))....)))).))))))))...))))))).........))))....))))..(((....(((.(..((((((....))))))..).)))....)))......))

Thermodynamic Ensemble Prediction

,,...{,...,,,...((((..,.{{,{((,,..,(({.....(({{.((((((((.((((({.,,.(((((((.......(((((((((((...{{{{...........}})})))).)))))))....))))))},(((...}},..............,,...,,,,,)))),...,}).))))))))....,.,||,}..{,....,,....,,,...||.......,..|,....,,.{{,,..,.......(((((((.....((((((((((((....,,,|,|,.....|,.....{{{....,},,.,{|...(((((......))))).,,}....}}},.))))))))...)))))))....,.,,}))))....))))..(((....(((.{..((((({....})))))..).)))....)))......,)