Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0003000

Sequence Length

341 nt

GC Content

0.3812

ACGGAUUCCAUUUCUAGCCCUGUAAGACCAGUAAUAAAUUUCUGUCUACUGAUGAUUCUAUUGAAUUGAAAUGCAGAGCCAAUGGCAUCUUUCAGAAAAGAUAUGAAACCAGUUCUACAUCAGCUGGUGAUCGAUAUGAUUCCUUGCUGGGUCGCUCUGGAUCAUACAGUUACUUAGAAGAAAGAAAACCUUACAGCAGCAGGCUAGAAAAGGAUGACUCAACUGACUUUAAAAAGCUUUAUGAACAAAUUCUAGCUGAAAAUGAAAAGCUGAAGGCACAGCUACAUGAUACAAAUAUGGAACUAACAGAUCUUAAAUUACAGUUGGAAAAGGCCACCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-67.50 kcal/mol

Ensemble Metrics

Free Energy: -75.37

Frequency: 0.0000

Diversity: 97.99

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((..(((.((((((((((((((((..((((((((......))).)))))..(((((....)))))..........(((...))).((((((((.((...(((((..((((..(.((.(((((.((.((((.....)))).)).))))))).)..)))).)))))...)).)).....))))))....))))))).....))))))))).))).....................(((((.........(((((((((...(((...(((((......))))).)))...........(((.((...)).))).......))))))))))))))...))..

Thermodynamic Ensemble Prediction

..((..(((.((((((((((((((((..{{({{,,....,{{|||,|}|||{.((({({{,,|}}||,......,||{{|,,,))}|||{{||}}..,}}}||{||.,((((,,{.{{.{{{((,{(,((((,...,)))},},.))))))}.)..)))),)))),,,}}}.,|},,,,,.,,,.....))))))).....))))))))).)))....|{,.{{{..,,.....,{{{,,.........{((((((((...,{,...(((((......))))).|||........,.}|,,.,,...,,.}},.....,.))))))))}..|},...}}..