Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0008000

Sequence Length

268 nt

GC Content

0.4664

UACCUCAAAUCGUUUGUGGGCUGAGGAUAGUACUGAGAAAGAAAAGGACAGUGUUCCUACGGCAGUGACCAUUCCUGUUGCUCCAACUGUUGUAAAUGCUGCAGCUUCUACCACAACCCUGACUACAACUACUGCUGGCACUGUCUCCUCCACAACAGAGGUCAGGGAGAGACGCAGAUCAUACCUCACUCCUGUUAGGGAUGAAGAGUCUGAAUCCCAAAGAAAAGCAAGAUCUAGACAAGCAAGACAAUCUAGAAGAUCAACACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.70 kcal/mol

Ensemble Metrics

Free Energy: -62.78

Frequency: 0.0013

Diversity: 47.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((..((......))..)))))....))(((..........(((((((((.....((((((((.....((..((((........((((((.....))))))........))))...)).......)))))))))))))))))((((.......))))...((((.((((.(...(((..(((.((....)).)))..))).).))))...))))..............((((((............)))))).........)))

Thermodynamic Ensemble Prediction

(((((((..((,....,))..))))}....))(((..........(((((((((.....((((((((.....,,..((((........((((((.....})))))........))}}...},.......}))))))))))))))))((((.......))))...((((.((((.{...(((,.(((.((....)).))).,))).}.))))...))))............,,((((((............)))))}...}}....)))