Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0008300

Sequence Length

323 nt

GC Content

0.4427

GUCAGGAGUUCGAGACCAGCCUGGCCAACAUGGAUGAAACCCCAUCUCCACUAAAAAUAAAAAAAUUAGUCGGGCGUGGUGGUAUGUGCAGGUAGUCCCAGCUACUCAGGAGGCUGAGGUGAGAGAAUCACUUGAACCCGGGAGGCAGAGGUUACAGUGAGCUGAGAUCGCGCCACUGCACUCCAGCCUGGGCGACAGAGCGAGACUUUGUCUCAAAAAAAAACAAAACAAACAAAAAAAAGAUUUAGAAAGGAAUUUGAUACCUGUCUUCCAAUAUUUGAAAAUACUGUAGGUAGAGAAUAAUUUAAAACCCCUUUUAGUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.80 kcal/mol

Ensemble Metrics

Free Energy: -83.64

Frequency: 0.0004

Diversity: 77.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.(((...)))...))))))(.((.........(((((((.((((((((...........))))).))).)))).)))..((.(((((.....(((((........)))))((((((.....)))))).......((((((((.(((....((((.......))))))).)))).)))).))))).))(((((((.....)))))))...................................((((((.((((..((((((.(....................)))))))..))))...........)))))).)).)

Thermodynamic Ensemble Prediction

((((((.(({...}))...))))))(.{{.{{,{.,..(((((((.((((((((...........))))).))).)))).)))..||,((((({,,,.(((({.{,,,,..}})))|(((((.....)))))}...,,,.((((((((.(((....((((.......))))))).)))).)))).}}})),),(((((((.....))))))),,..........................,,,{{{.,,,,,|,||||,.||||||}|.,||,.,,........||,||,||||},,,},,..,}},.....)))}}),)).)