Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0011100

Sequence Length

436 nt

GC Content

0.4174

AUAAGACAAAACCCCUGGCUUCUGUAACUAAUGCCAACACUUCUAGUACACAAGCAGCUCCUGUAGCUGUUACAACACCUACUGUGUCAUCAGGUCAAGCAACACCUACAUCACCUAUUAAAAAGUUUCCAACCACAGCUACAAAAAUUUCUCCCAAAGAAGAAGAGAGAAAAGAUGAGUCUCCUGCAACUUGGAGGUUAGGACUUAGAAAGACGGGCAGCUAUGGUGCACUUGCUGAAAUCACAGCAUCUAAAGAGGGUCAGAAAGAAAAAGAUACUGCAGGUGUUACACGUUCAGCUUCAAGUCCCAGACUUUCCUCCUCUUUGGAUAAUAAAGAAAAGGAGAAAGAUAGUAAAGGAACUAGGCUUGCAUAUGUUGCACCUACAAUACCAAGACGACUAGCCAGUACAUCUGACAUUGAAGAGAAAGAAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-85.70 kcal/mol

Ensemble Metrics

Free Energy: -95.07

Frequency: 0.0000

Diversity: 72.33

Structure Visualization

Structure Prediction

MFE Structure Prediction

..............(((..((((....((..........(((((.((((.(((((.((((.(((((((((....((((.....))))....((((........))))...........................)))))))))....((((((.(.........).))))))...((((((((((.((...)).)))...))))))).......)))).))).))))))...(((((......))))).....)))))((((((.............((.((((((.(((.((.((((((..(((((...(((.((((((((((((.....))))))...))))...)).)))...)).))))))).)).)).))).)))))).))...........(((....)))...)))))).....))....))))..)))

Thermodynamic Ensemble Prediction

..............{((,,{{((,,.......},.....{{{{{.((((.({(((.((((,(((((((((....{{{{.....)))}....((((........)))).................|,........)))))))))....((((((.,.........).))))},...((((((((((.({...}).)))...))))))).......)))).))).}}))))...(((((......))))).,,..}}}}}((((({..........,,.((.((((((.(((.((.{(((((..{((((...(((.((((((((((((.....)))))}..,))))...)).)))...))},))))))},).}}.))).)))))).}}...........,{,.,.,)))...)))))).,,........}}}}..)))