Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0012300

Sequence Length

364 nt

GC Content

0.3956

UGAAAAACGGGACAAGAAAUCUCCACUAAUUGAAUCAACAGCAAAUAUGGACAAUAAUCAGUCACAGAAGACCUUUAAAAACAAAGAGACGUUGAUUAUUGAACCAGAGAAAAAUGCAUCCCGUAUUGAAUCUCUGGAACAAGAAAAGGUUGAUGAAGAAGAAGAAGGAAAGAAGGAUGAGUCUAGCUGCUCUAGUGAAGAAGAUGAGGAAGAUGACUCGGAAUCAGAAGCUGAAACAGAUAAGACAAAACCCCUGGCUUCUGUAACUAAUGCCAACACUUCUAGUACACAAGCAGCUCCUGUAGCUGUUACAACACCUACUGUGUCAUCAGGUCAAGCAACACCUACAUCACCUAUUAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.00 kcal/mol

Ensemble Metrics

Free Energy: -71.27

Frequency: 0.0000

Diversity: 90.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.....)(.............((((.((.(((.........))).))))))((((((((((((......)))((((........))))....)))))))))..(((((((..(((((.....)))))...))))))).........((((.((((....................(((((..(.(((((((...(((.(((((..(((........)))((...((((((((.......................))))))))...))..........)))))....))).)))))))...((((.(((....))).)))).)..)))))((((........)))).))))))))........)

Thermodynamic Ensemble Prediction

({......{(({.......}}||||,{..{{,.,,,,,{..,.....}},,((((((((((((......}}}((((......,,)),}....)))))))))..(((((((..(((((.....)))))...))))))).........{{{||((((..,.....,..{{......,{,,,,,||,{((((((...(({.{(({{..(((........)))|,...((((((((,.....,..............,}))))))))...,...........)))))..,,),,.}}|}|||..,{{{|,||||...,||,||,,,|,,}},,,||||........)})).)))))}}}........)