Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0013600

Sequence Length

467 nt

GC Content

0.3854

ACUUUUAAUACAGGCAGGCUAUGAUGUUAAUAUUAAAGACUAUGAUGGCUGGACACCUCUUCAUGCUGCAGCUCAUUGGGGUAAAGAAGAAGCAUGUCGAAUUUUAGUGGACAAUCUGUGUGAUAUGGAGAUGGUCAACAAAGUGGGCCAAACAGCCUUUGAUGUAGCAGAUGAAGACAUUUUAGGAUAUUUAGAAGAGUUGCAAAAGAAACAAAAUCUGCUCCAUAGUGAAAAACGGGACAAGAAAUCUCCACUAAUUGAAUCAACAGCAAAUAUGGACAAUAAUCAGUCACAGAAGACCUUUAAAAACAAAGAGACGUUGAUUAUUGAACCAGAGAAAAAUGCAUCCCGUAUUGAAUCUCUGGAACAAGAAAAGGUUGAUGAAGAAGAAGAAGGAAAGAAGGAUGAGUCUAGCUGCUCUAGUGAAGAAGAUGAGGAAGAUGACUCGGAAUCAGAAGCUGAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-91.40 kcal/mol

Ensemble Metrics

Free Energy: -100.40

Frequency: 0.0000

Diversity: 130.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((((..((((........))))..)))))...((((.(((((((((((...(((((.((((.((......)).))))..))))).((.(((.((...((((((((...(((((.(..(((((((.(((((.((...)).)))))..(((((((((((((...(((((....)))))....)))))..)))).))))....(((.......))).)))))))..........).)).)))....)))))))).....)).))))).....(((((........))).)).....(((((........(..(((.((.....(((..(((((((..(((((.....)))))...)))))))..)))...)).)))..).........)))))............))))))))).))))))...((...((((........))))...)).))))(((...)))

Thermodynamic Ensemble Prediction

.(((((((((..((((........))))..)))))},,{(((.({{((((((((.,,(((((.((((.((,....,)).))))..))))}.|{.{((,{{.,.((((((((...((({(,{..((((({{.{((((.{(...}}.))))}..(({((({{,{(({,,{((((,....}}|||,..,,,|||,.}}}).))},,...||,......,)))}))))))}.,.....,,,},}},,},....)))))))}..,,.||.}|}}}.....,||,({{{{{{{{|||......}}|((((........}}.|,,.,}}}}}}}||..(((((((..(((((.....)))))...)))))))..}},...,}.)))}.}.........,,,,,......,,..,.))))))))}.}}))))...,,...{(((........))))...}},|,}}(({...)))