Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP1R12A_0017600

Sequence Length

250 nt

GC Content

0.4160

GCUUGCAUUGAUGACAAUGUUGAUAUGGUGAAGUUUCUGGUAGAAAAUGGAGCAAAUAUUAAUCAACCUGAUAAUGAAGGCUGGAUACCACUACAUGCAGCAGCUUCCUGUGGAUAUCUUGAUAUUGCAGAGUUUUUGAUUGGUCAAGGAGCACAUGUAGGGGCUGUCAACAGUGAAGGAGAUACACCUUUAGAUAUUGCGGAGGAGGAGGCAAUGGAAGAGCUACUUCAAAAUGAAGUUAAUCGGCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.60 kcal/mol

Ensemble Metrics

Free Energy: -58.66

Frequency: 0.0003

Diversity: 43.05

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(.((..((.(((((((.....((((..((((((((((........(((...(((((.(((...))))))))...)))...)))))((.(((...(((((((((((((....(((((((....((((...))))....)))))))..)))).)..)))))))).....))).))))))).))))....)))))))))..)).).))))..((...((...((((((...))))))...))..))..

Thermodynamic Ensemble Prediction

((((.(.((..((.(((((((.....((((..(((((({(((........(((...((((,,(({...})))))))...)))...}}}}|{{,{,{{..(((((({({((((....(((((((....((({...})))....)))))))..},)),,.}))))))))....,))).,)))))).))))....)))))))))..)).).))))..((...((...((((({...})))))...))..))..