Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP2R5A_0001700

Sequence Length

292 nt

GC Content

0.4897

AAUCUUCCUCGGUCACCCAGGAUGGAGUGUAGUGGCGCGAUCUCCACUCACUGCAACCUCUGCUGCCAGGGUUCAAGCAAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGGGCUUACAGAGUGUGCUCCUUCUACUUAUUACAAAAAAAAAAGUUAGCUGUAAAGCAGCCUCAGGCAGGCCCUUCAGGAGGUAUUCUAGAAGAUGUGGAGAUGAGACAGUGACGUAGAUGAUCCUGACCCUGGUGGUCUGUGAAUUCCUGCACAACACCAUGUGGUUUUAAUUACUAAAUGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.30 kcal/mol

Ensemble Metrics

Free Energy: -84.16

Frequency: 0.0001

Diversity: 68.08

Structure Visualization

Structure Prediction

MFE Structure Prediction

(....((((.((....))))))((.((((.(((((........))))))))).))......((((((((((((....((.((((((((.((((..(((((((((((..((((.(((...))).)).))..))))))...................(((....))).((((.....)))).((((((((....)))).))))..).)))).)))).))).)).).)).)).....)))))))))))).((((........))))..(((....))).....)(((.....)))

Thermodynamic Ensemble Prediction

,....{(({.((...,),|||}((.((((.(((((.,....,.))))))))).)).,,,..(((((((((((({,.,{,.,(((((((.((((..((((,((((((..((((.({(...})},)).))..)))))}...................(((....))).((({.....)))).((((((((....)))).))))..,.)))).)))).))).)).}.,),}}....})))))))))))).((((........)))).,({{...{|||.....,,||,,..,)))