Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP2R5A_0007100

Sequence Length

384 nt

GC Content

0.3828

UUGGUAUAUGAAUUCUUCUUGAGAUUUUUGGAGAGCCCUGAUUUCCAGCCUAGCAUUGCAAAACGAUACAUUGAUCAGAAAUUCGUACAACAGCUCCUGGAGCUUUUUGAUAGUGAAGAUCCCAGAGAACGUGACUUCCUGAAGACUGUUCUGCACCGAAUUUAUGGGAAAUUUCUUGGAUUAAGAGCAUUCAUCAGAAAACAAAUUAACAACAUUUUCCUCAGUAUUAUCAAUGGCUUUGCAUUGCCACUGAAAGCAGAACAUAAACAAUUUCUAAUGAAGGUUCUUAUUCCUAUGCAUACUGCAAAAGGAUUAGCUUUGUUUCAUGCUCAGGUGAUCAGAGGACUGCUGAAAUUUUGGCCAAAAACCUGCAGUCAGAAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.10 kcal/mol

Ensemble Metrics

Free Energy: -85.20

Frequency: 0.0000

Diversity: 128.75

Structure Visualization

Structure Prediction

MFE Structure Prediction

((........))(((((((((((.(((((((((((((((((((....(((((((((.(((((......(((((.((((((...........(((((...))))))))))))))))((((((((((((((((.(.(((....))).))))))).)..........)))))....))))(((.(((((((.(((((.(((((.................................((((........))))(((....)))...........))))).))))).))))))).)))..((((...))))...........)))))...))))).)))))))))).)).)).))..........))))))).)).))...)).)))))

Thermodynamic Ensemble Prediction

((........))(((((((({({.{{{{{({||{{({((((((....(((((((({.({{{{,{{{..{{((,{((((((,,,,,,.....{((((..,}}}}}||}}}}}}}})|||{|||{{{{(({{{.,.,|||,,|,|}.,||||||,|...,......}}}||,.,,}}}|(((.(((((((.{((((.(((({..............,|,,..,,,{{....{((.((((........)))),)))..},,},..........})))).))))).))))))}.|||,.((({...})))..|}}}.,,,,})))),,,))))).)))))))))).)|,||{{,,...,,||..},})))}.},,))}}}}}.}))))