Sequence Details

BLAST PRIMER
Symbol
hsa_PRDM5_0007700
Sequence Length
356 nt
GC Content
0.3483
GAGAUCCUAAGAAAAAGCUUAUAUGUUCAGUGUGCAAUAAAAAGUGUUCUUCAGCAUCAAGCCUACAGGAACAUAGAAAGAUUCAUGAGAUAUUUGAUUGUCAAGAAUGUAUGAAGAAAUUUAUUUCAGCUAAUCAGCUAAAACGUCAUAUGAUCACCCACUCAGAUAUGAGAUUGUCUCCACUCAUUUUUUUAAUAGAAAAACGACCCUAUAAUUGCGAGAUUUGUAAUAAGUCUUUCAAGAGGCUUGAUCAAGUGGGUGCUCACAAAGUAAUACACAGCGAAGACAAACCUUACAAAUGCAAACUUUGUGGAAAGGGAUUUGCCCACAGAAAUGUUUACAAGAAUCAUAAGAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-59.40 kcal/mol
Ensemble Metrics
Free Energy: -68.43
Frequency: 0.0000
Diversity: 98.60
Structure Visualization
Structure Prediction
MFE Structure Prediction
(....)(((((......))).(((((((.(((.((........(((((....)))))...)).)))..)))))))....(((((.((((((((((..((((.......((((((.((((....))))((((....))))......))))))...((((((((......(((....(((((...((.(((((((...))))))).))........(((.((((((((...)))))))).))))))))....))))))))))).(((((((((....((.....(((......))).....))...)))))))))...(((.....))))))))))))))).)).)))))......))
Thermodynamic Ensemble Prediction
(....)((.,,......|||.(((((((.{((.({........(((({,,..,||,,...)).})),.))))))}....{((((.((({(({{{{...|,|}}.},}},|{{{{.{,,.....}}}}((((....))))......||,}}|||,((((((((..(({,,(({...,}}},...||.{(((((,...}))))),.|,.......,((({((,,,||}}}})|||||||.,,.))))))),,}}.)))))))).{((((((((....,,.....(((......))).....}}...)))))))))...(((.....))),||.,,})))}}.}}.))))),,....})
Back