Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PRDM5_0011300

Sequence Length

164 nt

GC Content

0.3902

GGUGAAAAGUUCGGACCCUUUGCUGGAGAGAAGAGAAUGCCUGAAGACUUGGAUGAAAAUAUGGAUUACAGGUUGAUGUGGGAGAGAAAGUGGACUGUUGAGAUAUCUUACUAGACAGUUCUUUUAGAGAUCUGAAGUUCUUCGUUGAAAAAUAAGUUUUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-29.20 kcal/mol

Ensemble Metrics

Free Energy: -33.15

Frequency: 0.0017

Diversity: 36.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

(........(((....((......))...))).......)(((((((((((((((((.....(((((.((((((....(((((((........((((((.((........)).)))))))))))))..)))))).)))))))))))......)))).)))))))

Thermodynamic Ensemble Prediction

(........(((....((......))...))).......)(((((((((((,,,,,,,....(((((.((((((..,.{{(((({......,,((((((.((......,.)).)))))))))))))..)))))).))))),,,}))......))))))))))))