Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PREX2_0001600

Sequence Length

250 nt

GC Content

0.3840

AUGUUGUUCUCAAACAUUGAAGACAUCCUUGCAGUACAUAAAGAAUUCUUAAAAGUCGUGGAAGAAUGCUUACACCCCGAACCUAAUGCUCAACAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCUGAGCGUGACGCUGGAGCAAGCCAUCAUUCUGGCCAGAAGCCACGGACUGCCACCUCGUUACAUCAUGCAGGCUACAGAUGUGAUGCGGAAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.80 kcal/mol

Ensemble Metrics

Free Energy: -43.36

Frequency: 0.0031

Diversity: 38.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.......)))))(((((.(((.(((.((..((...(((....)))....))..)).))).)))))).))...........(((((((...............................................................)))))))..((.(((.....((((......))))......)))))..((((..((.(((((((((.((.......))))))))))).))..))))

Thermodynamic Ensemble Prediction

{((((,,,..,.}}}}}||{((.(({.(((.((..((...(((....)))....))..)).))).}))))).},..,,,......(((((((...............................................................)))))))...{{{||....}||,,....,,||||.....)))),)}.((((..((.(((((((((.((.......))))))))))).))..))))