Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PREX2_0003500

Sequence Length

264 nt

GC Content

0.4583

AACUGCAUGCUGCUUGGAGGACGGAAGAACACAGAUGUUCCCUUGGAAGGAUAUUUAGUAACACCAAUACAAAGAAUAUGCAAGUACCCUCUUAUUUUGAAGGAGUUGCUGAAGCGGACUCCACGGAAACACAGUGACUAUGCAGCAGUGAUGGAAGCCCUCCAAGCCAUGAAAGCUGUCUGUUCCAACAUAAACGAGGCCAAGAGACAGAUGGAGAAGUUAGAAGUUUUAGAGGAAUGGCAGUCUCACAUUGAAGGCUGGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.40 kcal/mol

Ensemble Metrics

Free Energy: -61.31

Frequency: 0.0001

Diversity: 88.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((.((((((((((((((..((...(((((....)))))(((....)))((((((.(((.......)))...))))))((((.(.((.((.......)).))).)))).....))..)))))....................)))))).)))..))..((((.(((((((..(((((((.((((((((...(((....(((.........)))....)))....))).....)))))))))).))..)))....)))).))))

Thermodynamic Ensemble Prediction

..((.((((((((((((((,.{{...(((((....}))))((,,{{,}|,...(((((((((.((....,,{(({,{{,....|,....}},},}}}}}..)).))))))))).}}..))))).}}...,,,.||,.|,..,|))))}),}))..,).,||||,|||{{{{..,{((((({{((((,,{...,{{..,,{{|..,,,,,,.}}}....}}}....})),....))}}}}))))}||,.}}}....)))),})))