Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PREX2_0015100

Sequence Length

426 nt

GC Content

0.4296

AACGUAAGACAUCAGAGGGCAUAAUACCAACAGACAGUGACAAUGAGAAGGGAGAAAGAAACAGCAAACGGGUAUGUUUUAAUGUAGCAGGAGAUGAACAGGAAGAUUCUGGUCAUGACACCAUCAGCAACAGAGACUCUUACAGUGACUGCAACAGCAAUAGGAAUUCCAUCGCCUCCUUCACCAGCAUCUGCAGCAGCCAGUGCAGCUCGUAUUUCCACAGUGAUGAAAUGGACUCAGGUGAUGAACUUCCCUUAAGUGUUCGCAUAUCUCAUGAUAAACAGGACAAGAUACAUAGUUGCCUUGAGCAUCUUUUCAGCCAGACAGAUGAACAAGCCAUGUUAGAAGAUACACUGGUUGCACUAUUUGAUUUGGAAAAGGUUUCCUUUUACUUUAAACCAUCAGAAGAGGAACCUCUGGUUGCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-88.60 kcal/mol

Ensemble Metrics

Free Energy: -97.10

Frequency: 0.0000

Diversity: 122.52

Structure Visualization

Structure Prediction

MFE Structure Prediction

...(((....((((((((........((((((((.((((.((((.(((((((((...((((((((......)).))))))..(((.((((..(.((...((((.(.(((((....(((.....)))....))))).))))).)).)..)))).))).............((((((((..((((....((((((((((.((....)).))).)))..........))))...))))...))))))))...)))))))...(((((...((((....))))....)))))...........((.((((..(((((..((.....)).)))))..)))).))(((........))))).)))))))).))))..)))).......((((((((.((..........)))))))))))))))))))))..

Thermodynamic Ensemble Prediction

...(({....((((((((........{{{,{{{{.{(((.{{,{.{{(((((((...(((((({(......}}.))))))..(((.((((..{.((...((({,(.(((((....(((.....)))....))))).})))).)).}..)))).))),,....{{....,|(((((({,,|||,...,({,{{({{{{.{{.,,}))||||.|||,,,,,,....,,))...}))}...})))))))...})))))}...|((((,..((((....))))....))))},,.,,,...,}}|,||||..{((((,{(,..,,,||,|||||..}}||{||{((........)))})})))}},}),)))).,)))),,,,}},{(((((((.{{..........}))))))))})))))))))))..