Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PRKCI_0004000

Sequence Length

278 nt

GC Content

0.4964

UGUUCCCUUGUGUACCAGAACGUCCUGGGAUGCCUUGUCCAGGAGAAGAUAAAUCCAUCUACCGUAGAGGUGCACGCCGCUGGAGAAAGCUUUAUUGUGCCAAUGGCCACACUUUCCAAGCCAAGCGUUUCAACAGGCGUGCUCACUGUGCCAUCUGCACAGACCGAAUAUGGGGACUUGGACGCCAAGGAUAUAAGUGCAUCAACUGCAAACUCUUGGUUCAUAAGAAGUGCCAUAAACUCGUCACAAUUGAAUGUGGGCGGCAUUCUUUGCCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-74.50 kcal/mol

Ensemble Metrics

Free Energy: -81.30

Frequency: 0.0000

Diversity: 85.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

......((((((.((((((..(((((.((.((((..((((.(((.........))).....(((((..((((((((((....((((..((((...((((((...)).))))...........)))).))))....)))))))...((((((.....)))))))))...)))))))))..)).)))).))))).....((((.....))))...)).)))).)))))).....(((((...(((.......))).)))))(.((((.....)))).)..

Thermodynamic Ensemble Prediction

.,{{,.{(((((.(({((...{((((,((.,,{{..{{{|,|||..,,,,...}}},}},.(({{{..|{{(((((((..{{{{((,,((({...((((((...))},))}......,,,,.)))).))))..,.)))))))...((((((.....))))))}}}...}})))))}},,)).,|)),}))}}....,((({.....)))}...}}}}))).}}))))..,|,||,,,..,|,||||||...}}.))}}}||(({{.....)))).,,.