Sequence Details

BLAST PRIMER
Symbol
hsa_PRKCI_0004800
Sequence Length
341 nt
GC Content
0.4692
AAUCCAUCUACCGUAGAGGUGCACGCCGCUGGAGAAAGCUUUAUUGUGCCAAUGGCCACACUUUCCAAGCCAAGCGUUUCAACAGGCGUGCUCACUGUGCCAUCUGCACAGACCGAAUAUGGGGACUUGGACGCCAAGGAUAUAAGUGCAUCAACUGCAAACUCUUGGUUCAUAAGAAGUGCCAUAAACUCGUCACAAUUGAAUGUGGGCGGCAUUCUUUGCCACAGGAACCAGUGAUGCCCAUGGAUCAGUCAUCCAUGCAUUCUGACCAUGCACAGACAGUAAUUCCAUAUAAUCCUUCAAGUCAUGAGAGUUUGGAUCAAGUUGGUGAAGAAAAAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-84.50 kcal/mol
Ensemble Metrics
Free Energy: -92.24
Frequency: 0.0000
Diversity: 116.22
Structure Visualization
Structure Prediction
MFE Structure Prediction
......(((.(((((..((((((((((....((((..((((...((((((...)).))))...........)))).))))....)))))))...((((((.....)))))))))...))))))))(((((...)))))........((((.....))))..(((((..(((((.....(..(((..(((((.(((...(((((((((((..((..(((.(((....((...(((.(((((..((((((.....)))))))))))))).))..))).)))..))...)))))))......))))....)))))))))))..)......)))))....)))))
Thermodynamic Ensemble Prediction
..,,{,{((.(((((..((((((((((..{{{{((,,((({...((((((...))},))}......,,,,.)))).))))..,.)))))))...((((((.....)))))))))...)))))}},(((({...|||||,.......{{((,,,{{||||..{({{(|||,{,{,,|,.{{{{{,..,,{{{,(((,,.,{{{,||||||.||{|,|||,|||}.,.{(,..{({,({(({.{((((((.....}))))})}}}}))).}}.}},.}},,..,}...}})}}},....,,}}}}.,..})))))))))},.}..,})}))),,.....,,},
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