Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PRKCI_0010400

Sequence Length

286 nt

GC Content

0.4056

UUAUUUUGGAAAAACAAAUUCGCAUACCACGUUCUCUGUCUGUAAAAGCUGCAAGUGUUCUGAAGAGUUUUCUUAAUAAGGACCCUAAGGAACGAUUGGGUUGUCAUCCUCAAACAGGAUUUGCUGAUAUUCAGGGACACCCGUUCUUCCGAAAUGUUGAUUGGGAUAUGAUGGAGCAAAAACAGGUGGUACCUCCCUUUAAACCAAAUAUUUCUGGGGAAUUUGGUUUGGACAACUUUGAUUCUCAGUUUACUAAUGAACCUGUCCAGCUCACUCCAGAUGACGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-56.80 kcal/mol

Ensemble Metrics

Free Energy: -64.09

Frequency: 0.0000

Diversity: 111.59

Structure Visualization

Structure Prediction

MFE Structure Prediction

....((((......)))).(((((((((((((((((((((((((.....))))...(((((..((.(((((.......))))).))..)))))((.(((((.((((((((.....)))))...((((...)))).)))))))).))((((((........))))))...)))))))....)))..)))))).....................(((((((....(((.(((((((....(((...)))(((((....))))).))))))).)))))))))))).)))

Thermodynamic Ensemble Prediction

{{{{(((((({.,,{......{{{.,(((((((({{{{{,((({...,,|}}}{{.(((((..,({{,,,|}},....))))).)}..)))))|,.|||{.|||{(((((.....)))))...((({...)))),))}}})))}),})))}}}}},.,,}{{{,,|,.{{,.|{{{{....{{{{{|||,....,},{{{{{{{{{{{,.,{{{.,,})})))))))}}|||,{....{{,...}}}|,,......,}}))}))),,,)))).},,))})}..))}