Sequence Details

BLAST PRIMER
Symbol
hsa_PTK2_0000800
Sequence Length
384 nt
GC Content
0.5625
AUUGGAAACCAACAUAUAUAUCAGCCUGUGGGUAAACCAGAUCCUGCAGCUCCACCAAAGAAACCGCCUCGCCCUGGAGCUCCCGGUCAUCUGGGAAGCCUUGCCAGCCUCAGCAGCCCUGCUGACAGCUACAACGAGGGUGUCAAGCUUCAGCCCCAGGAAAUCAGCCCCCCUCCUACUGCCAACCUGGACCGGUCGAAUGAUAAGGUGUACGAGAAUGUGACGGGCCUGGUGAAAGCUGUCAUCGAGAUGUCCAGUAAAAUCCAGCCAGCCCCACCAGAGGAGUAUGUCCCUAUGGUGAAGGAAGUCGGCUUGGCCCUGAGGACAUUAUUGGCCACUGUGGAUGAGACCAUUCCCCUCCUACCAGCCAGCACCCACCGAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-104.20 kcal/mol
Ensemble Metrics
Free Energy: -113.36
Frequency: 0.0000
Diversity: 117.82
Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((...................((((.((((...((((((((.(.(((((((.....((.......))....))))))).).))..))))))(((((.(((.((.((((..((((...))))...........)))).)).)))))))).))))))))............(((.(((..(((...)))(((.(((....)))..)))))).)))...(((.(.(((.(((((((.(.(.(((((.(.(((.(((((((..(((.(((((((.(((((.(((........))).))))).........))).)))).....)))..))))))).)).).).))))).).).))).......))))))).))))...))))...
Thermodynamic Ensemble Prediction
{((({...,,,........,}{..,{.((((((...((((((((.(.(((((((.....({.......)}....))))))).}.))..))))))(((({,(((.((.(((({{(({{..,|}}},..}|,.....}))).)).)))))))).|||{((((...,(((,,....{{{,.},},,..,}}))(((.{((....)))..))),({(......}}}.,|{{|||{{||,..{|||,|||,.,.|||,{|}}|.....||||{{,||||(((((.{((.......,))).))))).,)),.},.)))},)),,,}}.)),,.,,.{((((....{{(({.(,(,....,}.,,))),}}..))))}.)))))).}...}
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