Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0024500

Sequence Length

233 nt

GC Content

0.3991

UGCUACAAGGCAGAUGAUGUUAUUUUACCCACGAGGGCACAGCUGAAGCAUUGCCAGAAACAGAUGAUUAUGCUGAGAUUAUAGAUGAAGAAGAUACUUACACCAUGCCCUCAAAAAGCUAUGGAAUAGAUGAAGCCAGGGAUUAUGAGAUUCAAAGAGAAAGAAUAGAACUUGGACGAUGUAUUGGAGAAGGCCAAUUUGGAGAUGUACAUCAAGGCAUUUAUAUGAGUCCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.40 kcal/mol

Ensemble Metrics

Free Energy: -42.50

Frequency: 0.0013

Diversity: 39.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....((((.....))))...........(((((((((((..((.((((..........)))).))..))))........(.(((((......))).)).).)))))))....))).)(((((((((((...(((((..((((....(((.....)))...))))..)))))..((((((((((......)))..........)))))))....))))))).....))))

Thermodynamic Ensemble Prediction

((((....(({(,,,,.}}}},,},...,...(((((((((((..({.((((..........)))).})..))))........,.{{(((......))).}}.,.)))))))....))).)(((((((((((..,(((((..((((....(((.....)))...))))..))))).,((((((((((......))},.........)))))))....))))))).....))))