Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0025100

Sequence Length

229 nt

GC Content

0.4192

GUUGGCCAACAGCGAAAAGCAAGGCAUGCGGACACACGCCGUCUCUGUGUCAGAAACAGAUGAUUAUGCUGAGAUUAUAGAUGAAGAAGAUACUUACACCAUGCCCUCAAAAAGCUAUGGAAUAGAUGAAGCCAGGGAUUAUGAGAUUCAAAGAGAAAGAAUAGAACUUGGACGAUGUAUUGGAGAAGGCCAAUUUGGAGAUGUACAUCAAGGCAUUUAUAUGAGUCCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.00 kcal/mol

Ensemble Metrics

Free Energy: -46.20

Frequency: 0.0011

Diversity: 45.68

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((....((.....))..(((.((......)).)))(((((.((((((........))))...)).)))))......(((((......))).))((((((.........)).))))((((.((....(((((..((((....(((.....)))...))))..)))))...)).))))......)))))))(.((((((((........)))))........))))

Thermodynamic Ensemble Prediction

(((((((....((.....))..(((.{({(......}))}{(((({((,{{{...,}},,,}}}..,})}}},}}....,.||{{{......))).,.((((({,........)}.))))((((.((....(((((..((((....(((.....)))...))))..)))))...)).))))......))))))}|{((((((((........)))))........))))