Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0031200

Sequence Length

250 nt

GC Content

0.3720

AUUGCGGAAGCAUGAGAAGAUUCUGUAACUGAGAGGCAUUCUUCAAGCUGCUGGAAAAUAUUACAGAAGGAACACCUUCCAAAUUUUGCUUCAAGCUCUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUCAGACCUCAGAAAGAAGGUGAACGGGCUUUGCCAUCAAUACCAAAGUUGGCCAACAGCGAAAAGCAAGGCAUGCGGACACACGCCGUCUCUGUGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.90 kcal/mol

Ensemble Metrics

Free Energy: -44.82

Frequency: 0.0003

Diversity: 69.49

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((((...........))))))))(((((((((........((((...(.(((((......(((((....)))))...))))).)....))))..........................................................((((........))))......(((((((.............((((.....)))).....)))))))..(((......))).)))))....))))

Thermodynamic Ensemble Prediction

.((((((((.{.,....,,.}))))))}((({{((({.,,},,|,,{{{,,||,||,,,..,...(((((....)))))...,,}||{|{...}|}|.,,....................................................,..{((({.....},}))),....{(({{{||,..,.....,...||}|},,..})))....,))}}|||..(((......})).)))))},,.})))