Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0038100

Sequence Length

188 nt

GC Content

0.3989

CCAUUAAUCCAUCUUAAAUUUUCAUACAUUUCAAAGUGAAGAGCGAUUAUAUGUUAGAGAUAGCUGAUCAAGUGGACCAGGAAAUUGCUUUGAAGUUGGGUUGUCUAGAAAUACGCUGGAUUAUUUCAGUGGAACUGGCAAUCGGCCCAGAAGAAGGAAUCAGUUACCUAACGGACAAGGGCUGCAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.20 kcal/mol

Ensemble Metrics

Free Energy: -37.46

Frequency: 0.0010

Diversity: 56.22

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.....((((.(((...(((((((..........)))))))..(((((...((((....))))))))))))))))...))(.(((.((((....((((((((.((((.....(((((((....)))))))...))))....))))))))..)))).)))((((..(((........)))))))...)

Thermodynamic Ensemble Prediction

((.,({{((,.((({..,((((,{......,.}}})),))))..}}}}}..,(((({.{.({((({|{,...|,,...,{,..,{{,((((....((((((((.((((.....(((((((....)))))))...)))).,..))))))))..}))),}}}))))),})),,}}.....})},,,...)