Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0044000

Sequence Length

250 nt

GC Content

0.3280

AUUGCGGAAGCAUGAGAAGAUUCUGUAACUGAGAGGCAUUCUUCAAGCUGCUGGAAAAUAUUACAGAAGGAACACCUUCCAAAUUUUGCUUCAAGCUCUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAAUUGCUUUGAAGUUGGGUUGUCUAGAAAUACGGCGAUCAUACUGGGAGAUGCGGGGCAAUGCACUAGAAAAGAAGUCUAACUAUGAAGUAUUAGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.02 kcal/mol

Ensemble Metrics

Free Energy: -39.29

Frequency: 0.0002

Diversity: 53.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((.(((.(((.((((((..((((.......))))...))).))).))).))).)).........(((((....)))))........(((((((((..............................................................)).)))))))..(((((((((....)).)))))))...((((....((((......))))))))........(((((((....)))..))))

Thermodynamic Ensemble Prediction

.((.(((.(((.((((((..((((.......))))...)))}})).))).))).)}..,,.,.,.(((((....))))).......,(((((({((,.,....................................................,......}}|||}}|||..((((((({{....}}.)))))))..,||,{..,.{{||,,}}},),},}|||........||||,,|.,,.}))}.)},,