Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0048700

Sequence Length

250 nt

GC Content

0.3880

GUAUGGAACCUGUGGUGACUUAAGAGUUGUAUAAUUGUGAGAGCUAAGCACAGUCCUUGUUAUUAAAUGACAGGUACUGCUCCUCUUGAAGAUCUUGUUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUCACCUGCGGUCAGAGGAGGUUCACUGGCUUCACGUGGAUAUGGGCGUCUCCAGUGUGAGGGAGAAGUAUGAGCUUGCUCACCCACCAGAGGAGUGGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.07 kcal/mol

Ensemble Metrics

Free Energy: -54.41

Frequency: 0.0009

Diversity: 76.84

Structure Visualization

Structure Prediction

MFE Structure Prediction

........(((.((((((((....)))......((((.(((((((.....((((.((((((((...)))))))).))))(((((((....((((.................................................................)))))))))))((((((((....)).))))))...))).))))))))(((((.(((.........))).))))).))))).))).......

Thermodynamic Ensemble Prediction

.....,.,(((,((((((({..{{{{,..,...,,|,{({{{(,..,{|,{{((.((((((((...)))))))).))))}|,))))}||.{(......))..................................................}}}}}}.,,)))},{{|.||(((((({..{((((({({{{.,,..,,,},)))).}|||}|},,,.}},..}})))).))).,|||||,.,}).)}})..