Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0048900

Sequence Length

250 nt

GC Content

0.4600

AGUCUCGCUCUGCCGCGCAGGCUGGAGUGCAGUGGUGUGAUCUCGGCUUACUGCAACCUUUGCCUUCUGGGUUCAAGCAAUUGUGCCUCAGCCUCCUGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUCACCUGCGGUCAGAGGAGGUUCACUGGCUUCACGUGGAUAUGGGCGUCUCCAGUGUGAGGGAGAAGUAUGAGCUUGCUCACCCACCAGAGGAGUGGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.81 kcal/mol

Ensemble Metrics

Free Energy: -68.16

Frequency: 0.0044

Diversity: 43.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((.((((((((((.(((((((.(((((((.((.(((.(((((......((((...))))...))))).))).)).))))))).)))))))..(((....................................................)))..))))).)))))))))((((((..((((..((((...(((((((((((........)))))..........)))))).))))..)))))))))).

Thermodynamic Ensemble Prediction

..((((.((((((((((.(((((((.(((((((,((.(({.{{{{{,..,,,|||,...,})),..)}))).}}}.}}.})))))),})))}}}.,|||....................................................}},..,)))).)))))))))((((((..((((..((((...((((({(((((........))))}{{{....}}})))))).))))..)))))))))).