Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0049000

Sequence Length

250 nt

GC Content

0.3880

AUCCAUGGUUGGUUGAAUCUGGAUGUGGAACCCGCUGACGUGGAUGGCUGACUGUAUUGUAUGUUAAACUUUAUCAUUUGUGACUUCUCUGUUUUAAAUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUCACCUGCGGUCAGAGGAGGUUCACUGGCUUCACGUGGAUAUGGGCGUCUCCAGUGUGAGGGAGAAGUAUGAGCUUGCUCACCCACCAGAGGAGUGGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.70 kcal/mol

Ensemble Metrics

Free Energy: -54.26

Frequency: 0.0031

Diversity: 72.23

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.((((.....)))))))))...((((((.(((((((((.((((((((..........))))........((((((.(((......))).))))))..................................................)))).)))).)))))..).)))))(((((....((((........))))..)))))(((((.(((.........))).)))))(((((....).))))..

Thermodynamic Ensemble Prediction

(((((,((((,,...}}})}}}}}{{{{,.{((,(((((((((.(((({(((.,,,..,,..}}}}........((((((.(((......))).))))))..................................................)))).})))}})))|,|,{|||||||{.,{{{{(({({{{.,,...,}}.}))).}|||}|}{{{,||{..,,)))).))).,|||||,..,).)))}..